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Q.127 Botany ⭐ 360° Option Elimination Active
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NEET 2021 Botany Question 127 Solution

Topic: Biotechnology: Principles and Processes · Official NTA Booklet Code M1
NEET 2021 Botany Question 127: Chronological Sequence of Steps in PCR Thermocycling

Question

Which of the following is a correct sequence of steps in a PCR (Polymerase Chain Reaction)?

  1. (1)Denaturation, Annealing, Extension
  2. (2)Denaturation, Extension, Annealing
  3. (3)Extension, Denaturation, Annealing
  4. (4)Annealing, Denaturation, Extension
✓
Verified Against NTA Final Answer Key
Option (1) : Denaturation, Annealing, Extension
📚 Biotechnology: Principles and Processes Easy
📋 Given Parameters & Problem Setup
Technique Polymerase Chain Reaction (PCR)
Target Correct chronological order of steps per cycle
⚡

The 30-Second Exam Hall Shortcut: ⚡ "D - A - E" (Denature →\to Anneal →\to Extend)

⏱️ Save ~15 seconds

Each thermal cycle of PCR follows the immutable sequence: 1. Denaturation of dsDNA (94∘C94^\circ\text{C}) →\to 2. Annealing of primers (50−60∘C50-60^\circ\text{C}) →\to 3. Extension by Taq polymerase (72∘C72^\circ\text{C})! Remember the acronym D-A-E. Match Option (1)!

1 Step 1: Denaturation — High temperature melts the hydrogen bonds between double-stranded DNA.
2 Step 2: Annealing — Lower temperature allows synthetic oligonucleotide primers to bind to complementary 3' template ends.
3 Step 3: Extension — Thermostable Taq DNA polymerase synthesizes new strands using dNTPs at ~72°C.
4 Order: Denaturation →\to Annealing →\to Extension.
5 Match Option (1).
🛡️
Why You Can 100% Trust This Shortcut: Canonical NCERT Biotechnology Principles on Polymerase Chain Reaction Steps.
📐

Step-by-Step Rigorous Workflow & Mathematical Proof

Step 1

The Three Successive Phases of PCR

In vitro enzymatic gene amplification relies on cyclic repetition of three thermal phases:

1. Denaturation (∼94∘C)⟶2. Annealing (∼54∘C)⟶3. Extension (∼72∘C)\mathbf{1.\text{ Denaturation } (\sim 94^\circ\text{C})} \longrightarrow \mathbf{2.\text{ Annealing } (\sim 54^\circ\text{C})} \longrightarrow \mathbf{3.\text{ Extension } (\sim 72^\circ\text{C})}
Step 2

Mechanisms of Each Phase

- Denaturation: Thermal disruption converts double-stranded target DNA into two separate single strands. - Annealing: Two sets of oligonucleotide primers hybridize to their complementary flanking sequences at the 3′3' ends of each template strand. - Extension: The thermostable enzyme *Taq* DNA polymerase (isolated from *Thermus aquaticus*) extends primers along the templates in the 5′→3′5' \to 3' direction by adding deoxynucleotides (dNTPsdNTPs).

⭐

360° Option Elimination Engine Key Feature

Diagnose every choice: Know exactly why the right option works and why distractors fail.

4-Option Deep Scan
1 1
✓ 100% Correct
Verdict & Scientific Reason:

The exact and only functional chronological sequence of events in each thermal cycle of PCR.

💡
Why this is airtight: None. Textbook standard sequence.
2 2
✗ Incorrect
Verdict & Scientific Reason:

DNA polymerase cannot extend before primers have annealed to provide a free 3'-OH group.

⚠️
Student Fallacy (Why candidates pick this trap): Placing extension prior to primer annealing.
3 3
✗ Incorrect
Verdict & Scientific Reason:

Cannot begin with extension on native double-stranded DNA.

⚠️
Student Fallacy (Why candidates pick this trap): Inverting the cycle starting point.
4 4
✗ Incorrect
Verdict & Scientific Reason:

Primers cannot anneal to target sequences while DNA is double-stranded prior to denaturation.

⚠️
Student Fallacy (Why candidates pick this trap): Assuming primers can bind before melting the double helix.
⚠️

NTA Trap Alert: Permutation Traps in Process Steps

NTA routinely scrambles the order of biological cycles (PCR, Calvin cycle, translation, prophase stages).

🛡️ How to avoid the -1 mark: Anchor: D-A-E (Denaturation →\to Annealing →\to Extension).
📖

Core NEET Syllabus Standard

NEET / NCERT Biology · Biotechnology: Principles and Processes Standard Benchmark
Core Scientific Principle Tested:

"Each cycle of PCR has three steps: (i) Denaturation, (ii) Primer annealing, and (iii) Extension of primers."

Syllabus Focus: Polymerase Chain Reaction (PCR)
✓ Core NEET UG Syllabus Anchor Syllabus & Academic Standards ↗

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